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Egyptian Journal of Medical Human Genetics

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Impact of genetic polymorphisms of four cytokine genes on treatment induced viral clearance in HCV infected Egyptian patients

Manar Obada, Ashraf El-Fert, Mohamed S. Hashim, Mones Obada, Nermin Ehsan, Omkolsoum Alhadad, Hala El-Said

Abstract


Background: Many factors contribute for viral clearance and response to antiviral therapy. Genetic polymorphisms of cytokines, chemokines, and their receptors can alter the immune response against Hepatitis C virus (HCV).
Aim of the study: The aim of the current study is to assess single nucleotide polymorphism (SNP) in the promoter region of IL-10, TNF-a, IFN-c and TGF-b as predictors of response to combined Pegylated interferon a/ribavirin (PEG–IFN/RBV) therapy in chronic HCV infected Egyptian patients.
Patients and methods: The study was conducted on 150 HCV infected patients and 100 apparently healthy control subjects. All patients were treated with PEG–IFN/RBV. They were classified
according to their response to treatment. Genotyping of IL-10, TNF-a, IFN-c and TGF-b were performed on peripheral blood DNA using polymerase chain reaction–restriction fragment-length polymorphism (PCR–RFLP) and primer specific assays.
Results: Overall, 83/150 (55.3%) patients achieved sustained virological response (SVR), whereas 67 (44.7%) did not. Age and BMI were significantly lower in patients who achieved SVR (P<0.05). IL-10 at site (1082) GG genotype was associated with SVR where odds ratio was 1.98 with 95% confidence interval (1.34–3.65). None of the other genes showed a significant association with SVR.
Conclusion: Analysis of IL-10 SNP at promoter site (1082) could be used as a pretreatment predictor of response to combined PEG–IFN/RBV treatment.




http://dx.doi.org/10.1016/j.ejmhg.2016.04.002
AJOL African Journals Online