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Climatic oscillations Epinephelus akaara mtDNA population expansion population genetics.
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Genetic population structuring and demographic history of red spotted grouper (<i>Epinephelus akaara</i>) in South and East China Sea
Abstract
Climatic oscillations during the Pleistocene ice ages in the Northwestern Pacific produced great changes in species’ geographical distribution and abundance, which could be expected to have genetic
consequences in marine fishes. In order to estimate the demographic history and genetic structure of Epinephelus akaara in South and East China Sea, 87 individuals were sampled from 7 localities throughout the distribution range of the species. Mitochondrial DNA (mtDNA) variations were analyzed using DNA sequence data from the 5’ end of the control region. Nucleotide diversity was moderate in E. akaara (0.011). The demographic history of E. akaara was examined using neutrality test and mismatch distribution analyses and results indicated late Pleistocene (162,000 ~ 542,000 years ago) population expansion occurred in the species. Molecular variance analysis (AMOVA) and conventional population statistic FST revealed statistically significant levels of genetic structuring existed in E. akaara.
consequences in marine fishes. In order to estimate the demographic history and genetic structure of Epinephelus akaara in South and East China Sea, 87 individuals were sampled from 7 localities throughout the distribution range of the species. Mitochondrial DNA (mtDNA) variations were analyzed using DNA sequence data from the 5’ end of the control region. Nucleotide diversity was moderate in E. akaara (0.011). The demographic history of E. akaara was examined using neutrality test and mismatch distribution analyses and results indicated late Pleistocene (162,000 ~ 542,000 years ago) population expansion occurred in the species. Molecular variance analysis (AMOVA) and conventional population statistic FST revealed statistically significant levels of genetic structuring existed in E. akaara.
