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African Journal of Biotechnology

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Utility of adzuki bean [Vigna angularis (Willd.) Ohwi & Ohashi] simple sequence repeat (SSR) markers in genetic analysis of mungbean and related Vigna spp.

HK Dikshit, D Singh, Akanksha Singh, Neelu Jain, Jyoti Kumari, TR Sharma

Abstract


In the present study, 78 mapped simple sequence repeat (SSR) markers representing 11 linkage groups of adzuki bean were evaluated for transferability to  mungbean and related Vigna spp. 41 markers amplified characteristic bands in at least one Vigna species. The transferability percentage across the genotypes ranged from 60.97 to 92.6% with 87.8% in Vigna radiata and Vigna mungo, 62.2% in Vigna unguiculata, 91.8% in Vigna umbellata, 78% in Vigna mungo var. sylvestris and 80% in Vigna trilobata, respectively. Five major clusters were observed using unweighted pair group method with an arithmetic mean (UPGMA) with each cluster representing a particular Vigna species. We have successfully utilized adzuki bean SSRs in amplifying microsatellite sequences in Vigna species and inferring phylogenetic relationships by correlating the rate of transfer among them. The polymorphic SSR markers identified in this study would be useful in the analysis of genetic diversity, gene mapping and other aspects of genetic studies in mungbean and related species.

Key words: Adzuki bean, simple sequence repeat (SSR), inter-genomic marker transferability, genetic diversity, mungbean, Vigna spp.




AJOL African Journals Online